First run full integration.

Matlab -> CVC output is now fully handled by the java app.  Currently
requires some manual setup, but once done everything just works from the
gui.  Some extra output needs work still.


git-svn-id: https://groke.mcmaster.ca/svn/grad/colin/branches/TableTool_javization@9653 57e6efec-57d4-0310-aeb1-a6c144bb1a8b